• CLSI MM13 A : 1ED 2006

    Superseded A superseded Standard is one, which is fully replaced by another Standard, which is a new edition of the same Standard.

    COLLECTION, TRANSPORT, PREPARATION, AND STORAGE OF SPECIMENS FOR MOLECULAR METHODS

    Available format(s):  Hardcopy, PDF

    Superseded date:  31-03-2023

    Language(s):  English

    Published date:  01-12-2005

    Publisher:  Clinical Laboratory Standards Institute

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    Table of Contents - (Show below) - (Hide below)

    Abstract
    Committee Membership
    Foreword
    1 Scope
    2 Introduction
    3 Standard Precautions
    4 Definitions
    5 Specimen Collection
      5.1 Analyte/Specimen Matrix
      5.2 Specimen Labeling and Collection
    6 Specimen Transport and Storage
      6.1 General Recommendations for Transport
      6.2 General Recommendations for Storage of
          Purified DNA
      6.3 General Recommendations for RNA Studies
      6.4 Recommendations for Collection, Transport, and
          Storage of Specific Specimen Types
    7 Sample Preparation
      7.1 Cell Enrichment/Selection
      7.2 Pathogen Enrichment and Concentration Methods
      7.3 Nucleic Acid Preparation
    8 Sample Storage
      8.1 Storage Requirements - DNA
      8.2 Sample Storage Requirements - RNA
      8.3 Peripheral Blood Mononuclear Cell (PBMC)
          Cryopreservation
    References
    Additional References
    Appendix A - Disruption of Tissue Samples Using Mortar
                 and Pestle
    Appendix B - PBMC Cryopreservation and Thawing Procedure
    Summary of Consensus/Delegate Comments and Subcommittee
    Responses
    The Quality System Approach
    Related CLSI/NCCLS Publications

    Abstract - (Show below) - (Hide below)

    Defines general principles for ensuring optimal specimen collection, transport, storage, and nucleic acid isolation for molecular diagnostic test methods.

    Scope - (Show below) - (Hide below)

    This guideline describes general principles for ensuring optimal specimen collection, transport, storage, and nucleic acid isolation for molecular diagnostic test methods. It is intended for all healthcare professionals responsible for obtaining and transporting specimens from patients or preparing samples for subsequent molecular tests. It is also intended for manufacturers of specimen collection devices and sample preparation reagents, kits, and instrumentation.In addition, this document describes specimen collection and transport devices, and sample preparation methods. Optimal storage conditions and special precautions for molecular methods are described. While this document is intended for diagnostic testing, it is possible that the principles described here may apply to other areas.NOTE: Measurand quality assessment should be undertaken at the level of the test method during method validation and is beyond the scope of this guideline. For information related to measurand (purified DNA or RNA) quality assessment, refer to the most current editions of the following CLSI/NCCLS documents: MM3—Molecular Diagnostic Methods for Infectious Diseases; MM5—Nucleic Acid Amplification Assays for Molecular Hematopathology; and/or MM9—Nucleic Acid Sequencing Methods in Diagnostic Laboratory Medicine.

    General Product Information - (Show below) - (Hide below)

    Development Note Supersedes NCCLS MM13 P (01/2006)
    Document Type Miscellaneous Product
    Publisher Clinical Laboratory Standards Institute
    Status Superseded
    Superseded By
    Supersedes

    Standards Referenced By This Book - (Show below) - (Hide below)

    CLSI MM9 A2 : 2ED 2014 NUCLEIC ACID SEQUENCING METHODS IN DIAGNOSTIC LABORATORY MEDICINE
    CLSI MM10 A : 1ED 2006 GENOTYPING FOR INFECTIOUS DISEASES: IDENTIFICATION AND CHARACTERIZATION
    PD ISO/TS 20658:2017 Medical laboratories. Requirements for collection, transport, receipt, and handling of samples
    CLSI MM19 A : 1ED 2011 ESTABLISHING MOLECULAR TESTING IN CLINICAL LABORATORY ENVIRONMENTS
    ISO/TS 20658:2017 Medical laboratories — Requirements for collection, transport, receipt, and handling of samples
    CLSI MM1 A3 : 3ED 2012 MOLECULAR METHODS FOR CLINICAL GENETICS AND ONCOLOGY TESTING
    CLSI NBS01 A6 : 6ED 2013 BLOOD COLLECTION ON FILTER PAPER FOR NEWBORN SCREENING PROGRAMS
    CLSI H21 A5 : 5ED 2008 COLLECTION, TRANSPORT, AND PROCESSING OF BLOOD SPECIMENS FOR TESTING PLASMA-BASED COAGULATION ASSAYS AND MOLECULAR HEMOSTASIS ASSAYS
    CLSI AUTO12 A : 1ED 2011 SPECIMEN LABELS: CONTENT AND LOCATION, FONTS, AND LABEL ORIENTATION
    CLSI MM17 P : 1ED 2007 VERIFICATION AND VALIDATION OF MULTIPLEX NUCLEIC ACID ASSAYS
    PD ISO/TS 17822-1:2014 In vitro diagnostic test systems. Qualitative nucleic acid-based in vitro examination procedures for detection and identification of microbial pathogens General requirements, terms and definitions
    CLSI M40 A2 : 2014 QUALITY CONTROL OF MICROBIOLOGICAL TRANSPORT SYSTEMS
    CLSI MM21 : 1ED 2015 GENOMIC COPY NUMBER MICROARRAYS FOR CONSTITUTIONAL GENETIC AND ONCOLOGY APPLICATIONS
    CLSI NBS01 A5 : 5ED 2007 BLOOD COLLECTION ON FILTER PAPER FOR NEWBORN SCREENING PROGRAMS
    CLSI GP44 A4 : 4ED 2010 PROCEDURES FOR THE HANDLING AND PROCESSING OF BLOOD SPECIMENS FOR COMMON LABORATORY TESTS
    CLSI MM17 A : 1ED 2008 VERIFICATION AND VALIDATION OF MULTIPLEX NUCLEIC ACID ASSAYS
    CLSI AUTO12 P : 1ED 2010 SPECIMEN LABELS: CONTENT AND LOCATION, FONTS, AND LABEL ORIENTATION
    CLSI MM5 A2 : 2ED 2012 NUCLEIC ACID AMPLIFICATION ASSAYS FOR MOLECULAR HEMATOPATHOLOGY
    CLSI QMS01 A4 : 4ED 2011 QUALITY MANAGEMENT SYSTEM: A MODEL FOR LABORATORY SERVICES
    CLSI MM1 A2 : 2ED 2006 MOLECULAR DIAGNOSTIC METHODS FOR GENETIC DISEASES
    CLSI MM22 A : 1ED 2014 MICROARRAYS FOR DIAGNOSIS AND MONITORING OF INFECTIOUS DISEASES
    CLSI MM6 A2 : 2ED 2010 QUANTITATIVE MOLECULAR METHODS FOR INFECTIOUS DISEASES
    CLSI MM20 A : 1ED 2012 QUALITY MANAGEMENT FOR MOLECULAR GENETIC TESTING
    CLSI MM3 A3 : 3ED 2015 MOLECULAR DIAGNOSTIC METHODS FOR INFECTIOUS DISEASES
    ISO/TS 17822-1:2014 In vitro diagnostic test systems Qualitative nucleic acid-based in vitro examination procedures for detection and identification of microbial pathogens Part 1: General requirements, terms and definitions
    CLSI M29 A4 : 4ED 2014 Protection of Laboratory Workers From Occupationally Acquired Infections
    CLSI MM19 P : 1ED 2011 ESTABLISHING MOLECULAR TESTING IN CLINICAL LABORATORY ENVIRONMENTS
    CLSI M53 A : 1ED 2011 CRITERIA FOR LABORATORY TESTING AND DIAGNOSIS OF HUMAN IMMUNODEFICIENCY VIRUS INFECTION
    CLSI MM16 A : 1ED 2006 USE OF EXTERNAL RNA CONTROLS IN GENE EXPRESSION ASSAYS
    CLSI M53 P : 1ED 2010 CRITERIA FOR LABORATORY TESTING AND DIAGNOSIS OF HIV INFECTION
    CLSI MM3 A2 : 2ED 2006 MOLECULAR DIAGNOSTIC METHODS FOR INFECTIOUS DISEASES
    CLSI GP33 A : 1ED 2010 ACCURACY IN PATIENT AND SAMPLE IDENTIFICATION

    Standards Referencing This Book - (Show below) - (Hide below)

    CLSI M29 A3 : 3ED 2005 ACQUIRED INFECTIONS; APPROVED GUIDELINE
    CLSI MM9 A : 1ED 2004 NUCLEIC ACID SEQUENCING METHODS IN DIAGNOSTIC LABORATORY MEDICINE
    CLSI LA4 A4 : 4ED 2003 BLOOD COLLECTION ON FILTER PAPER FOR NEWBORN SCREENING PROGRAMS
    CLSI MM3 P2 : 2ED 2005 MOLECULAR DIAGNOSTIC METHODS FOR INFECTIOUS DISEASES
    CLSI MM5 A : 1ED 2003 NUCLEIC ACID AMPLIFICATION ASSAYS FOR MOLECULAR HEMATOPATHOLOGY
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